Hartman Institute for Therapeutic Organ Regeneration

Publications

Found 32 results
Author Title Type [ Year(Asc)]
Filters: Keyword is Gene Expression Regulation  [Clear All Filters]
2023
Hagedorn EJ, Perlin JR, Freeman RJ, Wattrus SJ, Han T, Mao C, Kim JWook, Fernández-Maestre I, Daily ML, D'Amato C et al..  2023.  Transcription factor induction of vascular blood stem cell niches in vivo.. Dev Cell. 58(12):1037-1051.e4.
2021
Duarte RRR, Copertino DC, Iñiguez LP, Marston JL, Bram Y, Han Y, Schwartz RE, Chen S, Nixon DF, Powell TR.  2021.  Identifying FDA-approved drugs with multimodal properties against COVID-19 using a data-driven approach and a lung organoid model of SARS-CoV-2 entry.. Mol Med. 27(1):105.
Hisata S, Racanelli AC, Kermani P, Schreiner R, Houghton S, Palikuqi B, Kunar B, Zhou A, McConn K, Capili A et al..  2021.  Reversal of emphysema by restoration of pulmonary endothelial cells.. J Exp Med. 218(8)
2020
Li X, Pritykin Y, Concepcion CP, Lu Y, La Rocca G, Zhang M, King B, Cook PJ, Au YWah, Popow O et al..  2020.  High-Resolution In Vivo Identification of miRNA Targets by Halo-Enhanced Ago2 Pull-Down.. Mol Cell. 79(1):167-179.e11.
Lehmann GL, Hanke-Gogokhia C, Hu Y, Bareja R, Salfati Z, Ginsberg M, Nolan DJ, Mendez-Huergo SP, Dalotto-Moreno T, Wojcinski A et al..  2020.  Single-cell profiling reveals an endothelium-mediated immunomodulatory pathway in the eye choroid.. J Exp Med. 217(6)
2018
Durán JGabriel Ba, Lis R, Lu TM, Rafii S.  2018.  In vitro conversion of adult murine endothelial cells to hematopoietic stem cells.. Nat Protoc. 13(12):2758-2780.
2017
Mendelson K, Pandey S, Hisano Y, Carellini F, Das BC, Hla T, Evans T.  2017.  The ceramide synthase 2b gene mediates genomic sensing and regulation of sphingosine levels during zebrafish embryogenesis.. Elife. 6
2016
Chaudhary N, Gonzalez E, Chang S-H, Geng F, Rafii S, Altorki NK, McGraw TE.  2016.  Adenovirus Protein E4-ORF1 Activation of PI3 Kinase Reveals Differential Regulation of Downstream Effector Pathways in Adipocytes.. Cell Rep. 17(12):3305-3318.
Simsek S, Zhou T, Robinson CL, Tsai S-Y, Crespo M, Amin S, Lin X, Hon J, Evans T, Chen S.  2016.  Modeling Cystic Fibrosis Using Pluripotent Stem Cell-Derived Human Pancreatic Ductal Epithelial Cells.. Stem Cells Transl Med. 5(5):572-9.
Redmond D, Poran A, Elemento O.  2016.  Single-cell TCRseq: paired recovery of entire T-cell alpha and beta chain transcripts in T-cell receptors from single-cell RNAseq.. Genome Med. 8(1):80.
2015
Sundaravel S, Duggan R, Bhagat T, Ebenezer DL, Liu H, Yu Y, Bartenstein M, Unnikrishnan M, Karmakar S, Liu T-C et al..  2015.  Reduced DOCK4 expression leads to erythroid dysplasia in myelodysplastic syndromes.. Proc Natl Acad Sci U S A. 112(46):E6359-68.
2014
Sandler VM, Lis R, Liu Y, Kedem A, James D, Elemento O, Butler JM, Scandura JM, Rafii S.  2014.  Reprogramming human endothelial cells to haematopoietic cells requires vascular induction.. Nature. 511(7509):312-8.
2013
Kumar R, DiMenna L, Schrode N, Liu T-C, Franck P, Muñoz-Descalzo S, Hadjantonakis A-K, Zarrin AA, Chaudhuri J, Elemento O et al..  2013.  AID stabilizes stem-cell phenotype by removing epigenetic memory of pluripotency genes.. Nature. 500(7460):89-92.
2011
Ye J, Chen S, Maniatis T.  2011.  Cardiac glycosides are potent inhibitors of interferon-β gene expression.. Nat Chem Biol. 7(1):25-33.
2010
Kikuchi K, Holdway JE, Werdich AA, Anderson RM, Fang Y, Egnaczyk GF, Evans T, Macrae CA, Stainier DYR, Poss KD.  2010.  Primary contribution to zebrafish heart regeneration by gata4(+) cardiomyocytes.. Nature. 464(7288):601-5.
2009
Chan AS, Jensen KK, Skokos D, Doty S, Lederman HK, Kaplan RN, Rafii S, Rivella S, Lyden D.  2009.  Id1 represses osteoclast-dependent transcription and affects bone formation and hematopoiesis.. PLoS One. 4(11):e7955.
2008
Kadereit B, Kumar P, Wang W-J, Miranda D, Snapp EL, Severina N, Torregroza I, Evans T, Silver DL.  2008.  Evolutionarily conserved gene family important for fat storage.. Proc Natl Acad Sci U S A. 105(1):94-9.
2005
Zhang F, Cheng J, Lam G, Jin DK, Vincent L, Hackett NR, Wang S, Young LM, Hempstead B, Crystal RG et al..  2005.  Adenovirus vector E4 gene regulates connexin 40 and 43 expression in endothelial cells via PKA and PI3K signal pathways.. Circ Res. 96(9):950-7.
2004
Suzuki YJ, Evans T.  2004.  Regulation of cardiac myocyte apoptosis by the GATA-4 transcription factor.. Life Sci. 74(15):1829-38.
2001
Kim J, Wu H, Hawthorne L, Rafii S, Laurence J.  2001.  Endothelial cell apoptotic genes associated with the pathogenesis of thrombotic microangiopathies: an application of oligonucleotide genechip technology.. Microvasc Res. 62(2):83-93.
Rafii S, Dias S, Meeus S, Hattori K, Ramachandran R, Feuerback F, Worgall S, Hackett NR, Crystal RG.  2001.  Infection of endothelium with E1(-)E4(+), but not E1(-)E4(-), adenovirus gene transfer vectors enhances leukocyte adhesion and migration by modulation of ICAM-1, VCAM-1, CD34, and chemokine expression.. Circ Res. 88(9):903-10.
Dias S, Choy M, Rafii S.  2001.  The role of CXC chemokines in the regulation of tumor angiogenesis.. Cancer Invest. 19(7):732-8.
1996
Suzuki E, Evans T, Lowry J, Truong L, Bell DW, Testa JR, Walsh K.  1996.  The human GATA-6 gene: structure, chromosomal location, and regulation of expression by tissue-specific and mitogen-responsive signals.. Genomics. 38(3):283-90.
1995
Yang HY, Evans T.  1995.  Homotypic interactions of chicken GATA-1 can mediate transcriptional activation.. Mol Cell Biol. 15(3):1353-63.
Trainor CD, Evans T, Felsenfeld G.  1995.  Negative regulation of chicken GATA-1 promoter activity mediated by a hormone response element.. Mol Endocrinol. 9(9):1135-46.