Hartman Institute for Therapeutic Organ Regeneration

Conformation of promoter DNA: fine mapping of S1-hypersensitive sites.

TitleConformation of promoter DNA: fine mapping of S1-hypersensitive sites.
Publication TypeJournal Article
Year of Publication1983
AuthorsSchon E, Evans T, Welsh J, Efstratiadis A
JournalCell
Volume35
Issue3 Pt 2
Pagination837-48
Date Published1983 Dec
ISSN0092-8674
KeywordsAnimals, Base Sequence, Beta-Globulins, Chickens, Chromatin, DNA, Superhelical, Endonucleases, Gene Expression Regulation, Hydrogen Bonding, Lac Operon, Nucleic Acid Conformation, Operon, Single-Strand Specific DNA and RNA Endonucleases, Temperature
Abstract

Larsen and Weintraub showed that a feature of active (but not inactive) chromatin is the appearance of S1-nuclease-hypersensitive sites in the 5'-flanking regions of expressing genes. Such sites are also present in supercoiled, but not relaxed, plasmids carrying these gene sequences. We have developed an in vitro approach to map, at the nucleotide level, S1-hypersensitive sites in artificially generated supercoiled circles of naked DNA. In the case of the adult chicken beta-globin gene, our results correlate extremely well with the coarser in vivo mapping. These sites reside in homopurine-homopyrimidine tracts, and, despite their S1 sensitivity, they do not seem to be single-stranded.

DOI10.1016/0092-8674(83)90116-2
Alternate JournalCell
PubMed ID6197185

Weill Cornell Medicine
Hartman Institute for Therapeutic Organ Regeneration
1300 York Ave, Box 136 New York, NY 10065